Basic Sciences Publications Archive

Akiyoshi B, Nelson CR, Biggins S. The aurora B kinase promotes inner and outer kinetochore interactions in budding yeast. Genetics. 2013 May 1.
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Lizhi Ian Gong, Marc A Suchard, Jesse D Bloom. Stability-mediated epistasis constrains the evolution of an influenza protein. eLife 2013;2:e00631. May 14, 2013.
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Furuyama T, Codomo CA, Henikoff S. Reconstitution of hemisomes on budding yeast centromeric DNA. Nucleic Acids Res. 2013 Apr 24.
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Martin-Castellanos C, Fowler KR, Smith GR. Making chromosomes hot for breakage. Cell Cycle. 2013 Apr 11; 12(9).
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Sarangapani KK, Akiyoshi B, Duggan NM, Biggins S, Asbury CL. Phosphoregulation promotes release of kinetochores from dynamic microtubules via multiple mechanisms. Proc Natl Acad Sci U S A. 2013 Apr 15.
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Lee EG, Stenbak CR, Linial ML. Foamy virus assembly with emphasis on pol encapsidation. Viruses. 2013 Mar 20; 5(3): 886-900.
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Yadon AN, Singh BN, Hampsey M, Tsukiyama T. DNA looping facilitates targeting of a chromatin remodeling enzyme. Mol Cell. 2013 Mar 5
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Nechiporuk T, Klezovitch O, Nguyen L, Vasioukhin V. Dlg5 maintains apical aPKC and regulates progenitor differentiation during lung morphogenesis. Dev Biol. 2013 Mar 2
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Zentner GE, Henikoff S. Regulation of nucleosome dynamics by histone modifications. Nat Struct Mol Biol. 2013 Mar 5; 20(3): 259-266.
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Teves SS, Henikoff S. The heat shock response: A case study of chromatin dynamics in gene regulation. Biochem Cell Biol. 2013 Feb; 91(1): 42-48.
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Hewamadduma CA, Grierson AJ, Ma TP, Pan L, Moens CB, Ingham PW, Ramesh T, Shaw PJ. Tardbpl splicing rescues motor neuron and axonal development in a mutant tardbp zebrafish. Hum Mol Genet. 2013 Feb 19.
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Zentner GE, Tsukiyama T, Henikoff S (2013) ISWI and CHD Chromatin Remodelers Bind Promoters but Act in Gene Bodies. PLoS Genet 9(2): e1003317.
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Akiyoshi B, Nelson CR, Duggan N, Ceto S, Ranish JA, Biggins S. The Mub1/Ubr2 ubiquitin ligase complex regulates the conserved Dsn1 kinetochore protein. PLoS Genet. 2013 Feb; 9(2): e1003216.
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Fowler KR, Gutierrez-Velasco S, Martin-Castellanos C, Smith GR. Protein determinants of meiotic DNA break hot spots. Mol Cell. 2013 Feb 7.
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Momeni B, Brileya KA, Fields MW, Shou W. Strong inter-population cooperation leads to partner intermixing in microbial communities. elife. 2013; 2: e00230.
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Nakayama M, Nakayama A, van Lessen M, Yamamoto H, Hoffmann S, Drexler HC, Itoh N, Hirose T, Breier G, Vestweber D, Cooper JA, Ohno S, Kaibuchi K, Adams RH. Spatial regulation of VEGF receptor endocytosis in angiogenesis. Nat Cell Biol. 2013 Jan 27
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Wragg RT, Snead D, Dong Y, Ramlall TF, Menon I, Bai J, Eliezer D, Dittman JS. Synaptic vesicles position complexin to block spontaneous fusion. Neuron. 2013 Jan 23; 77(2): 323-334.
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Malfavon-Borja R, Wu LI, Emerman M, Malik HS. Birth, decay, and reconstruction of an ancient TRIMCyp gene fusion in primate genomes. Proc Natl Acad Sci U S A. 2013 Jan 14.
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Sanchez-Arevalo Lobo VJ, Doni M, Verrecchia A, Sanulli S, Faga G, Piontini A, Bianchi M, Conacci-Sorrell M, Mazzarol G, Peg V, Losa JH, Ronchi P, Ponzoni M, Eisenman RN, Doglioni C, Amati B. Dual regulation of myc by abl. Oncogene. 2013 Jan 14.
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Hoot S, McGuire AT, Cohen KW, Strong RK, Hangartner L, Klein F, Diskin R, Scheid JF, Sather DN, Burton DR, Stamatatos L. Recombinant HIV envelope proteins fail to engage germline versions of anti-CD4bs bNAbs. PLoS Pathog. 2013 Jan; 9(1): e1003106.
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Miller AC, Obholzer ND, Shah AN, Megason SG, Moens CB. RNA-seq based mapping and candidate identification of mutations from forward genetic screens. Genome Res. 2013 Jan 8.
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2012

Wark AR, Mills MG, Dang LH, Chan YF, Jones FC, Brady SD, Absher DM, Grimwood J, Schmutz J, Myers RM, Kingsley DM, Peichel CL. Genetic architecture of variation in the lateral line sensory system of threespine sticklebacks. G3 (Bethesda). 2012 Sep; 2(9): 1047-1056.
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Momeni B, Shou W. Cryosectioning yeast communities for examining fluorescence patterns. J Vis Exp. 2012 Dec 26; (70). pii: 50101. doi(70): 10.3791/50101.
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Rodriguez J, Tsukiyama T. ATR-like kinase Mec1 facilitates both chromatin accessibility at DNA replication forks and replication fork progression during replication stress. Genes Dev. 2013 27: 74-86.
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Talbert PB, Henikoff S. Chromatin: Packaging without nucleosomes. Curr Biol. 2012 Dec 18; 22(24): R1040-3.
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Rincon-Arano H, Halow J, Delrow JJ, Parkhurst SM, Groudine M. UpSET recruits HDAC complexes and restricts chromatin accessibility and acetylation at promoter regions. Cell. 2012 Nov 20.
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Fior R, Maxwell AA, Ma TP, Vezzaro A, Moens CB, Amacher SL, Lewis J, Saude L. The differentiation and movement of presomitic mesoderm progenitor cells are controlled by mesogenin 1. Development. 2012 Dec; 139(24): 4656-4665.
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Hughes AL, Gottschling DE. An early age increase in vacuolar pH limits mitochondrial function and lifespan in yeast. Nature. 2012 Nov 21.
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Rodriguez-Mesa E, Abreu-Blanco MT, Rosales-Nieves AE, Parkhurst SM. Developmental expression of drosophila wiskott-aldrich syndrome family proteins. Dev Dyn. 2012 Dec; 241(12): C1.

Momeni B, Brileya KA, Fields MW, Shou W. Strong inter-population cooperation leads to partner intermixing in microbial communities. In press.

Waite AJ, Shou W. Feature Article: Adaptation to a new environment allows cooperators to purge cheaters stochastically. Proc Natl Acad Sci U S A. 2012 Nov 20;109(47):19079-86. doi: 10.1073/pnas.1210190109. Epub 2012 Oct 22.
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Abreu-Blanco MT, Verboon JM, Liu R, Watts JJ, Parkhurst SM. 2012. Drosophila embryos close epithelial wounds using a combination of cellular protrusions and an actomyosin purse string. J Cell Sci. Epub ahead of print, doi: 10.1242/​jcs.109066.
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