Vaccine and Infectious Disease Division

Recent Publications

Print outs of scientific publications

2014

VIDD Publications Archive

Current

Andrasik, M.P., Chandler, C., Powell, B., Humes, D., Wakefield, S., Kripke, K., Eckstein, D. (2014). Bridging the Divide: HIV Prevention Research and Black Men Who Have Sex With Men. Am J Public Health.
Full-text Article:  http://scholars.fhcrc.org/3123/
PubMed Record: http://www.ncbi.nlm.nih.gov/pubmed/24524520?otool=fhcrclib

Borthwick, N., Ahmed, T., Ondondo, B., Hayes, P., Rose, A., Ebrahimsa, U., Hayton, E.-J., Black, A., Bridgeman, A., Rosario, M., Hill, A.V., Berrie, E., Moyle, S., Frahm, N., Cox, J., Colloca, S., Nicosia, A., Gilmour, J., McMichael, A.J., Dorrell, L., Hanke, T. (2014). Vaccine-elicited Human T Cells Recognizing Conserved Protein Regions Inhibit HIV-1. Mol Ther, 22(2), 464-75. PMCID: PMC3911893.
Full-text Article:  http://scholars.fhcrc.org/3366/
PubMed Record: http://www.ncbi.nlm.nih.gov/pubmed/24166483?otool=fhcrclib

Corey, L., McElrath, M.J. (2014). One shot forward for HIV prevention. Nat Med, 20(3), 241-2.
Full-text Article:  http://scholars.fhcrc.org/3455/
PubMed Record: http://www.ncbi.nlm.nih.gov/pubmed/24603794?otool=fhcrclib

Corneli, A., Pettifor, A., Kamanga, G., Golin, C., McKenna, K., Ou, S.-S., Hamela, G., Massa, C., Martinson, F., Tharaldson, J., Hilgenberg, D., Yu, X., Chege, W., Hoffman, I., team, T.H.s. (2014). HPTN 062: A Feasibility and Acceptability Pilot Intervention to Reduce HIV Transmission Risk Behaviors Among Individuals with Acute and Early HIV Infection in Lilongwe, Malawi. AIDS Behav.
Full-text Article:  http://scholars.fhcrc.org/3127/
PubMed Record: http://www.ncbi.nlm.nih.gov/pubmed/24523007?otool=fhcrclib

Drake, A.L., Wagner, A., Richardson, B., John-Stewart, G. (2014). Incident HIV during Pregnancy and Postpartum and Risk of Mother-to-Child HIV Transmission: A Systematic Review and Meta-Analysis. PLoS Med, 11(2), e1001608. PMCID: PMC3934828.
Full-text Article:  http://scholars.fhcrc.org/3467/
PubMed Record: http://www.ncbi.nlm.nih.gov/pubmed/24586123?otool=fhcrclib

Espinosa, V., Jhingran, A., Dutta, O., Kasahara, S., Donnelly, R., Du, P., Rosenfeld, J., Leiner, I., Chen, C.-C., Ron, Y., Hohl, T.M., Rivera, A. (2014). Inflammatory monocytes orchestrate innate antifungal immunity in the lung. PLoS Pathog, 10(2), e1003940. PMCID: PMC3930594.
Full-text Article:  http://scholars.fhcrc.org/3468/
PubMed Record: http://www.ncbi.nlm.nih.gov/pubmed/24586155?otool=fhcrclib

Gray, G.E., Moodie, Z., Metch, B., Gilbert, P.B., Bekker, L.-G., Churchyard, G., Nchabeleng, M., Mlisana, K., Laher, F., Roux, S., Mngadi, K., Innes, C., Mathebula, M., Allen, M., McElrath, M.J., Robertson, M., Kublin, J., Corey, L., on behalf of the, H.P.s.t. (2014). Recombinant adenovirus type 5 HIV gag/pol/nef vaccine in South Africa: unblinded, long-term follow-up of the phase 2b HVTN 503/Phambili study. Lancet Infect Dis.
Full-text Article:  http://scholars.fhcrc.org/3336/
PubMed Record: http://www.ncbi.nlm.nih.gov/pubmed/24560541?otool=fhcrclib

Grinsztejn, B., Hosseinipour, M.C., Ribaudo, H.J., Swindells, S., Eron, J., Chen, Y.Q., Wang, L., Ou, S.-S., Anderson, M., McCauley, M., Gamble, T., Kumarasamy, N., Hakim, J.G., Kumwenda, J., Pilotto, J.H.S., Godbole, S.V., Chariyalertsak, S., de Melo, M.G., Mayer, K.H., Eshleman, S.H., Piwowar-Manning, E., Makhema, J., Mills, L.A., Panchia, R., Sanne, I., Gallant, J., Hoffman, I., Taha, T.E., Nielsen-Saines, K., Celentano, D., Essex, M., Havlir, D., Cohen, M.S., the, H.A.S.T. (2014). Effects of early versus delayed initiation of antiretroviral treatment on clinical outcomes of HIV-1 infection: results from the phase 3 HPTN 052 randomised controlled trial. Lancet Infect Dis.
Full-text Article:  http://scholars.fhcrc.org/3454/
PubMed Record: http://www.ncbi.nlm.nih.gov/pubmed/24602844?otool=fhcrclib

Harawa, N., Wilton, L., Wang, L., Mao, C., Kuo, I., Penniman, T., Shoptaw, S., Griffith, S., Williams, J.K., Cummings, V., Mayer, K., Koblin, B., Hptn. (2014). Types of Female Partners Reported by Black Men Who Have Sex with Men and Women (MSMW) and Associations with Intercourse Frequency, Unprotected Sex and HIV and STI Prevalence. AIDS Behav.
Full-text Article:  http://scholars.fhcrc.org/3131/
PubMed Record: http://www.ncbi.nlm.nih.gov/pubmed/24523006?otool=fhcrclib

Irvin, R., Wilton, L., Scott, H., Beauchamp, G., Wang, L., Betancourt, J., Lubensky, M., Wallace, J., Buchbinder, S. (2014). A Study of Perceived Racial Discrimination in Black Men Who Have Sex with Men (MSM) and Its Association with Healthcare Utilization and HIV Testing. AIDS Behav
Full-text Article:  http://scholars.fhcrc.org/3344/
PubMed Record: http://www.ncbi.nlm.nih.gov/pubmed/24569888?otool=fhcrclib

Johnston, C., Zhu, J., Jing, L., Laing, K.J., McClurkan, C.M., Klock, A., Diem, K., Jin, L., Stanaway, J., Tronstein, E., Kwok, W.W., Huang, M.-L., Selke, S., Fong, Y., Magaret, A., Koelle, D.M., Wald, A., Corey, L. (2014). Virologic and immunologic evidence of multifocal genital herpes simplex virus type 2 infection. J Virol.
Full-text Article:  http://scholars.fhcrc.org/3230/
PubMed Record: http://www.ncbi.nlm.nih.gov/pubmed/24554666?otool=fhcrclib

Nelson, D.B., Komaroff, E., Nachamkin, I., Haggerty, C.L., Dibble, L., Mastrogiannis, D., Liu, C., Fredricks, D.N. (2013). Relationship of selected bacterial vaginosis-associated bacteria to nugent score bacterial vaginosis among urban women early in pregnancy. Sex Transm Dis, 40(9), 721-3.
Full-text Article:  http://scholars.fhcrc.org/3176/
PubMed Record: http://www.ncbi.nlm.nih.gov/pubmed/23945426?otool=fhcrclib

Polis, C.B., Westreich, D., Balkus, J.E., Heffron, R., H. C. H. I. V. Observational Analysis Meeting, P.o.t. (2013). Assessing the effect of hormonal contraception on HIV acquisition in observational data: challenges and recommended analytic approaches. Aids, 27 Suppl 1, S35-43.
Full-text Article:  http://scholars.fhcrc.org/3247/
PubMed Record: http://www.ncbi.nlm.nih.gov/pubmed/24088682?otool=fhcrclib

Powers, J.H., Fleming, T.R. (2013). Noninferiority trials: clinical understandings and misunderstandings. Clin Investig (Lond), 3(3), 215-8. PMCID: PMC3929272.
Full-text Article:  http://scholars.fhcrc.org/3362/
PubMed Record: http://www.ncbi.nlm.nih.gov/pubmed/24563733?otool=fhcrclib

Seo, S., Xie, H., Campbell, A.P., Kuypers, J.M., Leisenring, W.M., Englund, J.A., Boeckh, M. (2014). Parainfluenza Virus Lower Respiratory Tract Disease after Hematopoietic Cell Transplantation: Viral Detection in the Lung Predicts Outcome. Clin Infect Dis.
Full-text Article:  http://scholars.fhcrc.org/3460/
PubMed Record: http://www.ncbi.nlm.nih.gov/pubmed/24599766?otool=fhcrclib

Slyker, J.A., Casper, C., Tapia, K., Richardson, B., Bunts, L., Huang, M.-L., Wamalwa, D., Benki-Nugent, S., John-Stewart, G. (2014). Accelerated suppression of primary EBV infection in HIV-infected infants initiating lopinavir/ritonavir-based versus nevirapine-based combination antiretroviral therapy. Clin Infect Dis.
Full-text Article:  http://scholars.fhcrc.org/3236/
PubMed Record: http://www.ncbi.nlm.nih.gov/pubmed/24550373?otool=fhcrclib

February

Aubert, M., Boyle, N.M., Stone, D., Stensland, L., Huang, M.-L., Magaret, A.S., Galetto, R., Rawlings, D.J., Scharenberg, A.M., Jerome, K.R. (2014). In vitro Inactivation of Latent HSV by Targeted Mutagenesis Using an HSV-specific Homing Endonuclease. Molecular therapy Nucleic acids, 3, e146.
Full-text Article:  http://scholars.fhcrc.org/3087/
PubMed Record: http://www.ncbi.nlm.nih.gov/pubmed/24496438?otool=fhcrclib

Balkus, J.E., Richardson, B.A., Rabe, L.K., Taha, T.E., Mgodi, N., Kasaro, M.P., Ramjee, G., Hoffman, I.F., Abdool Karim, S.S. (2014). Bacterial Vaginosis and the Risk of Trichomonas vaginalis Acquisition Among HIV-1-Negative Women. Sex Transm Dis, 41(2), 123-8.
Full-text Article:  http://scholars.fhcrc.org/2768/
PubMed Record: http://www.ncbi.nlm.nih.gov/pubmed/24413493?otool=fhcrclib

Bigham, A.W., Mackelprang, R.D., Celum, C., De Bruyn, G., Beima-Sofie, K., John-Stewart, G., Ronald, A., Mugo, N.R., Buckingham, K., Bamshad, M., Mullins, J.I., McElrath, M.J., Lingappa, J.R. (2014). Variants in host viral replication cycle genes are associated with heterosexual HIV-1 acquisition in Africans. Journal of acquired immune deficiency syndromes.
Full-text Article:  http://scholars.fhcrc.org/3030/
PubMed Record: http://www.ncbi.nlm.nih.gov/pubmed/24463784?otool=fhcrclib

Brewer, R.A., Magnus, M., Kuo, I., Wang, L., Liu, T.-Y., Mayer, K.H. (2014). The High Prevalence of Incarceration History Among Black Men Who Have Sex With Men in the United States: Associations and Implications. Am J Public Health.
Full-text Article:  http://scholars.fhcrc.org/2771/
PubMed Record: http://www.ncbi.nlm.nih.gov/pubmed/24432948?otool=fhcrclib

Brusic, V., Gottardo, R., Kleinstein, S.H., Davis, M.M., Hafler, D.A., Quill, H., Palucka, A.K., Poland, G.A., Pulendran, B., Reinherz, E.L., Stuart, K.D., Togias, A. (2014). Computational resources for high-dimensional immune analysis from the Human Immunology Project Consortium. Nat Biotechnol.
Full-text Article:  http://scholars.fhcrc.org/2842/
PubMed Record: http://www.ncbi.nlm.nih.gov/pubmed/24441472?otool=fhcrclib

Chapuis, A.G., Afanasiev, O.K., Iyer, J.G., Paulson, K.G., Parvathaneni, U., Hwang, J.H., Lai, I., Roberts, I.M., Sloan, H.L., Bhatia, S., Shibuya, K.C., Gooley, T., Desmarais, C., Koelle, D.M., Yee, C., Nghiem, P. (2014). Regression of metastatic Merkel cell carcinoma following transfer of polyomavirus-specific T cells and therapies capable of re-inducing HLA class-I. Cancer immunology research, 2(1), 27-36. PMCID: PMC3888869.
Full-text Article:  http://scholars.fhcrc.org/2775/
PubMed Record: http://www.ncbi.nlm.nih.gov/pubmed/24432305?otool=fhcrclib

Cori, A., Ayles, H., Beyers, N., Schaap, A., Floyd, S., Sabapathy, K., Eaton, J.W., Hauck, K., Smith, P., Griffith, S., Moore, A., Donnell, D., Vermund, S.H., Fidler, S., Hayes, R., Fraser, C., (PopART). (2014). HPTN 071 (PopART): A Cluster-Randomized Trial of the Population Impact of an HIV Combination Prevention Intervention Including Universal Testing and Treatment: Mathematical Model. PLoS One, 9(1), e84511. PMCID: PMC3893126.
Full-text Article:  http://scholars.fhcrc.org/2846/
PubMed Record: http://www.ncbi.nlm.nih.gov/pubmed/24454728?otool=fhcrclib

Heffron, R., Donnell, D., Kiarie, J., Rees, H., Ngure, K., Mugo, N., Were, E., Celum, C., Baeten, J.M., Partners in Prevention, H.T.S. (2014). A Prospective Study of the Effect of Pregnancy on CD4 Counts and Plasma HIV-1 RNA Concentrations of Antiretroviral-Naive HIV-1-Infected Women. Journal of acquired immune deficiency syndromes, 65(2), 231-6. PMCID: PMC3898601.
Full-text Article:  http://scholars.fhcrc.org/2839/
PubMed Record: http://www.ncbi.nlm.nih.gov/pubmed/24442226?otool=fhcrclib

Herold, B.C., Dezzutti, C.S., Richardson, B.A., Marrazzo, J., Mesquita, P.M.M., Carpenter, C., Huber, A., Louissaint, N., Marzinke, M.A., Hillier, S.L., Hendrix, C.W. (2014). Antiviral Activity of Genital Tract Secretions following Oral or Topical Tenofovir Pre-exposure Prophylaxis for HIV-1. Journal of acquired immune deficiency syndromes.
Full-text Article:  http://scholars.fhcrc.org/2851/
PubMed Record: http://www.ncbi.nlm.nih.gov/pubmed/24457633?otool=fhcrclib

Kahle, E., Campbell, M., Lingappa, J., Donnell, D., Celum, C., Ondondo, R., Mujugira, A., Fife, K., Mugo, N., Kapiga, S., Mullins, J.I., Baeten, J.M., Partners in Prevention, H.T.S.T. (2014). HIV-1 subtype C is not associated with higher risk of heterosexual HIV-1 transmission: a multinational study among HIV-1 serodiscordant couples. Aids, 28(2), 235-43.
Full-text Article:  http://scholars.fhcrc.org/2784/
PubMed Record: http://www.ncbi.nlm.nih.gov/pubmed/24413311?otool=fhcrclib

Kahle, E.M., Kashuba, A., Baeten, J.M., Fife, K.H., Celum, C., Mujugira, A., Essex, M., De Bruyn, G., Wald, A., Donnell, D., John-Stewart, G., Delany-Moretlwe, S., Mugo, N.R., Farquhar, C., Lingappa, J.R., Partners in Prevention, H.T.S.T. (2014). Unreported Antiretroviral Use by HIV-1-Infected Participants Enrolling in a Prospective Research Study. Journal of acquired immune deficiency syndromes, 65(2), e90-4. PMCID: PMC3898592.
Full-text Article:  http://scholars.fhcrc.org/2854/
PubMed Record: http://www.ncbi.nlm.nih.gov/pubmed/24442233?otool=fhcrclib

Knipe, D.M., Corey, L., Cohen, J.I., Deal, C.D. (2014). Summary and recommendations from a National Institute of Allergy and Infectious Diseases (NIAID) workshop on "Next Generation Herpes Simplex Virus Vaccines". Vaccine.
Full-text Article:  http://scholars.fhcrc.org/2996/ 
PubMed Record: http://www.ncbi.nlm.nih.gov/pubmed/24480025?otool=fhcrclib

Landis, M.J., Bedford, T. (2014). Phylowood: interactive web-based animations of biogeographic and phylogeographic histories. Bioinformatics, 30(1), 123-4. PMCID: PMC3866560.
Full-text Article:  http://scholars.fhcrc.org/2774/
PubMed Record: http://www.ncbi.nlm.nih.gov/pubmed/24191071?otool=fhcrclib

Logsdon, B.A., Dai, J.Y., Auer, P.L., Johnsen, J.M., Ganesh, S.K., Smith, N.L., Wilson, J.G., Tracy, R.P., Lange, L.A., Jiao, S., Rich, S.S., Lettre, G., Carlson, C.S., Jackson, R.D., O'Donnell, C.J., Wurfel, M.M., Nickerson, D.A., Tang, H., Reiner, A.P., Kooperberg, C., Project, N.G.E.S. (2014). A variational Bayes discrete mixture test for rare variant association. Genet Epidemiol, 38(1), 21-30.
Full-text Article:  http://scholars.fhcrc.org/3008/
PubMed Record: http://www.ncbi.nlm.nih.gov/pubmed/24482836?otool=fhcrclib

Mayer, K.H., Wang, L., Koblin, B., Mannheimer, S., Magnus, M., Del Rio, C., Buchbinder, S., Wilton, L., Cummings, V., Watson, C.C., Piwowar-Manning, E., Gaydos, C., Eshleman, S.H., Clarke, W., Liu, T.-Y., Mao, C., Griffith, S., Wheeler, D., Team, H.P. (2014). Concomitant Socioeconomic, Behavioral, and Biological Factors Associated with the Disproportionate HIV Infection Burden among Black Men Who Have Sex with Men in 6 U.S. Cities. PLoS One, 9(1), e87298.
Full-text Article:  http://scholars.fhcrc.org/3102/
PubMed Record: http://www.ncbi.nlm.nih.gov/pubmed/24498067?otool=fhcrclib

McKinnon, L.R., Hughes, S.M., De Rosa, S.C., Martinson, J.A., Plants, J., Brady, K.E., Gumbi, P.P., Adams, D.J., Vojtech, L., Galloway, C.G., Fialkow, M., Lentz, G., Gao, D., Shu, Z., Nyanga, B., Izulla, P., Kimani, J., Kimwaki, S., Bere, A., Moodie, Z., Landay, A.L., Passmore, J.-A.S., Kaul, R., Novak, R.M., McElrath, M.J., Hladik, F. (2014). Optimizing viable leukocyte sampling from the female genital tract for clinical trials: an international multi-site study. PLoS One, 9(1), e85675.
Full-text Article:  http://scholars.fhcrc.org/2858/
PubMed Record: http://www.ncbi.nlm.nih.gov/pubmed/24454917?otool=fhcrclib

Pattacini, L., Murnane, P.M., Fluharty, T.R., Katabira, E., de Rosa, S.C., Baeten, J.M., Lund, J.M. (2014). Enhanced and efficient detection of virus-driven cytokine expression by human NK and T cells. J Virol Methods.
Full-text Article:  http://scholars.fhcrc.org/2788/
PubMed Record: http://www.ncbi.nlm.nih.gov/pubmed/24418500?otool=fhcrclib

Roxby, A.C., Atkinson, C., Asbjornsdottir, K., Farquhar, C., Kiarie, J.N., Drake, A.L., Wald, A., Boeckh, M., Richardson, B., Emery, V., John-Stewart, G., Slyker, J.A. (2014). Maternal Valacyclovir and Infant Cytomegalovirus Acquisition: A Randomized Controlled Trial among HIV-Infected Women. PLoS One, 9(2), e87855. PMCID: PMC3913686.
Full-text Article:  http://scholars.fhcrc.org/3108/
PubMed Record: http://www.ncbi.nlm.nih.gov/pubmed/24504006?otool=fhcrclib

Small, D.S., Cheng, J., Halloran, M.E., Rosenbaum, P.R. (2013). Case Definition and Design Sensitivity. Journal of the American Statistical Association, 108(504), 1457-68. PMCID: PMCPMC3904399.
Full-text Article:  http://scholars.fhcrc.org/2797/
PubMed Record: http://www.ncbi.nlm.nih.gov/pubmed/24482549?otool=fhcrclib

Wald, A. (2014). Risk factors for anal intraepithelial neoplasia in women with genital dysplasia. Obstet Gynecol, 123(1), 183-4.
Full-text Article:  http://scholars.fhcrc.org/3001/ 
PubMed Record: http://www.ncbi.nlm.nih.gov/pubmed/24463682?otool=fhcrclib

Wald, A., Corey, L., Timmler, B., Magaret, A., Warren, T., Tyring, S., Johnston, C., Kriesel, J., Fife, K., Galitz, L., Stoelben, S., Huang, M.-L., Selke, S., Stobernack, H.-P., Ruebsamen-Schaeff, H., Birkmann, A. (2014). Helicase-primase inhibitor pritelivir for HSV-2 infection. N Engl J Med, 370(3), 201-10.
Full-text Article:  http://scholars.fhcrc.org/2789/
PubMed Record: http://www.ncbi.nlm.nih.gov/pubmed/24428466?otool=fhcrclib

Weber, N.D., Aubert, M., Dang, C.H., Stone, D., Jerome, K.R. (2014). DNA cleavage enzymes for treatment of persistent viral infections: Recent advances and the pathway forward. Virology.
Full-text Article:  http://scholars.fhcrc.org/3112/
PubMed Record: http://www.ncbi.nlm.nih.gov/pubmed/24485787?otool=fhcrclib

Zolla-Pazner, S., Decamp, A., Gilbert, P.B., Williams, C., Yates, N.L., Williams, W.T., Howington, R., Fong, Y., Morris, D.E., Soderberg, K.A., Irene, C., Reichman, C., Pinter, A., Parks, R., Pitisuttithum, P., Kaewkungwal, J., Rerks-Ngarm, S., Nitayaphan, S., Andrews, C., O'Connell, R.J., Yang, Z.-Y., Nabel, G.J., Kim, J.H., Michael, N.L., Montefiori, D.C., Liao, H.-X., Haynes, B.F., Tomaras, G.D. (2014). Vaccine-Induced IgG Antibodies to V1V2 Regions of Multiple HIV-1 Subtypes Correlate with Decreased Risk of HIV-1 Infection. PLoS One, 9(2), e87572. PMCID: PMC3913641.
Full-text Article:  http://scholars.fhcrc.org/3115/
PubMed Record: http://www.ncbi.nlm.nih.gov/pubmed/24504509?otool=fhcrclib

January

Arndt, M.B., John-Stewart, G., Richardson, B.A., Singa, B., van Lieshout, L., Verweij, J.J., Sangare, L.R., Mbogo, L.W., Naulikha, J.M., Walson, J.L. (2013). Impact of Helminth Diagnostic Test Performance on Estimation of Risk Factors and Outcomes in HIV-Positive Adults. PLoS One, 8(12), e81915. PMCID: PMC3852669.
Full-text Article:  http://scholars.fhcrc.org/2574/
PubMed Record: http://www.ncbi.nlm.nih.gov/pubmed/24324729?otool=fhcrclib

Baker, E.S., Burnum-Johnson, K.E., Jacobs, J.M., Diamond, D.L., Brown, R.N., Ibrahim, Y.M., Orton, D.J., Piehowski, P.D., Purdy, D.E., Moore, R.J., Danielson, W.F.r., Monroe, M.E., Crowell, K.L., Slysz, G.W., Gritsenko, M.A., Sandoval, J.D., Lamarche, B.L., Matzke, M.M., Webb-Robertson, B.-J.M., Simmons, B.C., McMahon, B.J., Bhattacharya, R., Perkins, J.D., Carithers, R.L.J., Strom, S., Self, S.G., Katze, M.G., Anderson, G.A., Smith, R.D. (2014). Advancing the High Throughput Identification of Disease Specific Protein Signatures Using Multiplexed Ion Mobility Spectrometry. Mol Cell Proteomics. [Epub ahead of print]
Full-text Article:  http://scholars.fhcrc.org/2738/
PubMed Record: http://www.ncbi.nlm.nih.gov/pubmed/24403597?otool=fhcrclib

Decamp, A., Hraber, P., Bailer, R.T., Seaman, M.S., Ochsenbauer, C., Kappes, J., Gottardo, R., Edlefsen, P., Self, S., Tang, H., Greene, K., Gao, H., Daniell, X., Sarzotti-Kelsoe, M., Gorny, M.K., Zolla-Pazner, S., Labranche, C.C., Mascola, J.R., Korber, B.T., Montefiori, D.C. (2013). Global Panel of HIV-1 Env Reference Strains for Standardized Assessments of Vaccine-Elicited Neutralizing Antibodies. J Virol. [Epub ahead of print]
Full-text Article:  http://scholars.fhcrc.org/2619/
PubMed Record: http://www.ncbi.nlm.nih.gov/pubmed/24352443?otool=fhcrclib

Dimitrov, D., Boily, M.-C., Brown, E.R., Hallett, T.B. (2013). Analytic Review of Modeling Studies of ARV Based PrEP Interventions Reveals Strong Influence of Drug-Resistance Assumptions on the Population-Level Effectiveness. PLoS One, 8(11), e80927. PMCID: PMC3840039.
Full-text Article:  http://scholars.fhcrc.org/2582/
PubMed Record: http://www.ncbi.nlm.nih.gov/pubmed/24282559?otool=fhcrclib

Dingle, T.C., Sedlak, R.H., Cook, L., Jerome, K.R. (2013). Tolerance of droplet-digital PCR vs real-time quantitative PCR to inhibitory substances. Clin Chem, 59(11), 1670-2.
Full-text Article:  http://scholars.fhcrc.org/2718/
PubMed Record: http://www.ncbi.nlm.nih.gov/pubmed/24003063?otool=fhcrclib

Finak, G., Jiang, W., Krouse, K., Wei, C., Sanz, I., Phippard, D., Asare, A., De Rosa, S.C., Self, S., Gottardo, R. (2013). High-throughput flow cytometry data normalization for clinical trials. Cytometry Part A : the journal of the International Society for Analytical Cytology.
Full-text Article:  http://scholars.fhcrc.org/2694/
PubMed Record: http://www.ncbi.nlm.nih.gov/pubmed/24382714?otool=fhcrclib

Gabriel, E.E., Gilbert, P.B. (2013). Evaluating principal surrogate endpoints with time-to-event data accounting for time-varying treatment efficacy. Biostatistics. [Epub ahead of print]
Full-text Article:  http://scholars.fhcrc.org/2639/
PubMed Record: http://www.ncbi.nlm.nih.gov/pubmed/24337534?otool=fhcrclib

Godfrey, C., Payton, M., Tasker, S., Proestel, S., Schouten, J.T. (2014). Ensuring participant safety and trial integrity with clinical trials oversight. Journal of acquired immune deficiency syndromes, 65 Suppl 1, S40-3.
Full-text Article:  http://scholars.fhcrc.org/2702/
PubMed Record: http://www.ncbi.nlm.nih.gov/pubmed/24321985?otool=fhcrclib

Godfrey, C., Schouten, J.T. (2014). Infection control best practices in clinical research in resource-limited settings. Journal of acquired immune deficiency syndromes, 65 Suppl 1, S15-8.
Full-text Article:  http://scholars.fhcrc.org/2703/
PubMed Record: http://www.ncbi.nlm.nih.gov/pubmed/24321978?otool=fhcrclib

Godfrey, C., Schouten, J.T., Swindells, S. (2014). Implementation of HIV-Related Clinical Research in the International Setting. Journal of acquired immune deficiency syndromes, 65 Suppl 1, S1-2.
Full-text Article:  http://scholars.fhcrc.org/2704/
PubMed Record: http://www.ncbi.nlm.nih.gov/pubmed/24321976?otool=fhcrclib

Goepfert, P.A., Elizaga, M.L., Seaton, K.E., Tomaras, G.D., Montefiori, D.C., Sato, A., Hural, J., Derosa, S.C., Kalams, S.A., McElrath, M.J., Keefer, M.C., Baden, L.R., Lama, J.R., Sanchez, J., Mulligan, M.J., Buchbinder, S., Hammer, S., Koblin, B., Pensiero, M., Butler, C., Moss, B., Robinson, H.L., the, H.S.G., the National Institutes of, A., Infectious Diseases, H.I.V.V.T.N. (2014). Specificity and Six-Month Durability of Immune Responses Induced by DNA and Recombinant Modified Vaccinia Ankara Vaccines Expressing HIV-1 Virus-like Particles. J Infect Dis. [Epub ahead of print]
Full-text Article:  http://scholars.fhcrc.org/2740/
PubMed Record: http://www.ncbi.nlm.nih.gov/pubmed/24403557?otool=fhcrclib

Gomberg-Maitland, M., Bull, T.M., Saggar, R., Barst, R.J., Elgazayerly, A., Fleming, T.R., Grimminger, F., Rainisio, M., Stewart, D.J., Stockbridge, N., Ventura, C., Ghofrani, A.H., Rubin, L.J. (2013). New trial designs and potential therapies for pulmonary artery hypertension. Journal of the American College of Cardiology, 62(25 Suppl), D82-91.
Full-text Article:  http://scholars.fhcrc.org/2620/
PubMed Record: http://www.ncbi.nlm.nih.gov/pubmed/24355645?otool=fhcrclib

Graham, J.B., Da Costa, A., Lund, J.M. (2013). Regulatory T Cells Shape the Resident Memory T Cell Response to Virus Infection in the Tissues. Journal of immunology. [Epub ahead of print]
Full-text Article:  http://scholars.fhcrc.org/2637/
PubMed Record: http://www.ncbi.nlm.nih.gov/pubmed/24337378?otool=fhcrclib

Ivy, D.D., Abman, S.H., Barst, R.J., Berger, R.M.F., Bonnet, D., Fleming, T.R., Haworth, S.G., Raj, J.U., Rosenzweig, E.B., Schulze Neick, I., Steinhorn, R.H., Beghetti, M. (2013). Pediatric pulmonary hypertension. Journal of the American College of Cardiology, 62(25 Suppl), D117-26.
Full-text Article:  http://scholars.fhcrc.org/2623/
PubMed Record: http://www.ncbi.nlm.nih.gov/pubmed/24355636?otool=fhcrclib

Kim, Y.-J., Guthrie, K.A., Waghmare, A., Walsh, E.E., Falsey, A.R., Kuypers, J., Cent, A., Englund, J.A., Boeckh, M. (2013). Respiratory Syncytial Virus in Hematopoietic Cell Transplant Recipients: Factors Determining Progression to Lower Respiratory Tract Disease. J Infect Dis. [Epub ahead of print]
Full-text Article:  http://scholars.fhcrc.org/2669/
PubMed Record: http://www.ncbi.nlm.nih.gov/pubmed/24368837?otool=fhcrclib

Mackelprang, R.D., Bigham, A.W., Celum, C., de Bruyn, G., Beima-Sofie, K., John-Stewart, G., Ronald, A., Mugo, N.R., Buckingham, K.J., Bamshad, M.J., Mullins, J.I., McElrath, M.J., Lingappa, J.R. (2013). Toll-like receptor polymorphism associations with HIV-1 outcomes among sub-Saharan Africans. J Infect Dis. [Epub ahead of print]
Full-text Article:  http://scholars.fhcrc.org/2595/
PubMed Record: http://www.ncbi.nlm.nih.gov/pubmed/24325963?otool=fhcrclib

Matrajt, L., Younan, P.M., Kiem, H.-P., Schiffer, J.T. (2014). The majority of CD4+ T-cell depletion during acute SHIV89.6P infection occurs in uninfected cells. J Virol. [Epub ahead of print]
Full-text Article:  http://scholars.fhcrc.org/2730/
PubMed Record: http://www.ncbi.nlm.nih.gov/pubmed/24390339?otool=fhcrclib

Murnane, P.M., Celum, C., Mugo, N., Campbell, J.D., Donnell, D., Bukusi, E., Mujugira, A., Tappero, J., Kahle, E.M., Thomas, K.K., Baeten, J.M., Partners Pr, E.P.S.T. (2013). Efficacy of preexposure prophylaxis for HIV-1 prevention among high-risk heterosexuals: subgroup analyses from a randomized trial. Aids. 27(13), 2155-60.
Full-text Article:  http://scholars.fhcrc.org/2690/
PubMed Record: http://www.ncbi.nlm.nih.gov/pubmed/24384592?otool=fhcrclib

Murphy, S.C., Shott, J.P., Parikh, S., Etter, P., Prescott, W.R., Stewart, V.A. (2013). Malaria diagnostics in clinical trials. The American journal of tropical medicine and hygiene, 89(5), 824-39. PMCID: PMC3820323.
Full-text Article:  http://scholars.fhcrc.org/2707/
PubMed Record: http://www.ncbi.nlm.nih.gov/pubmed/24062484?otool=fhcrclib

Nelson, D.B., Hanlon, A., Nachamkin, I., Haggerty, C., Mastrogiannis, D.S., Liu, C., Fredricks, D.N. (2014). Early Pregnancy Changes in Bacterial Vaginosis-Associated Bacteria and Preterm Delivery. Paediatr Perinat Epidemiol. [Epub ahead of print]
Full-text Article:  http://scholars.fhcrc.org/2747/
PubMed Record: http://www.ncbi.nlm.nih.gov/pubmed/24405280?otool=fhcrclib

Osoti, A.O., John-Stewart, G., Kiarie, J., Richardson, B.A., Kinuthia, J., Krakowiak, D., Farquhar, C. (2014). Home visits during pregnancy enhance male partner HIV counselling and testing in Kenya: a randomized clinical trial. Aids, 28(1), 95-103.
Full-text Article:  http://scholars.fhcrc.org/2760/
PubMed Record: http://www.ncbi.nlm.nih.gov/pubmed/23942059?otool=fhcrclib

Penezina, O., Krueger, N.X., Rodriguez-Chavez, I.R., Busch, M.P., Hural, J., Kim, J.H., O'Connell, R.J., Hunter, E., Aboud, S., Higgins, K., Kovalenko, V., Clapham, D., Crane, D., Levin, A.E., the, H.I.V.S.S.G. (2014). Performance of a Re-Designed HIV Selectest ELISA Optimized to Minimize Vaccine-Induced Seropositivity in HIV Vaccine Trial Participants. Clin Vaccine Immunol. [Epub ahead of print]
Full-text Article:  http://scholars.fhcrc.org/2748/
PubMed Record: http://www.ncbi.nlm.nih.gov/pubmed/24403525?otool=fhcrclib

Robinson, D.J., Reynolds, M., Casper, C., Dispenzieri, A., Vermeulen, J., Payne, K., Schramm, J., Ristow, K., Desrosiers, M.-P., Yeomans, K., Teltsch, D., Swain, R., Habermann, T.M., Rotella, P., Van de Velde, H. (2014). Clinical epidemiology and treatment patterns of patients with multicentric Castleman disease: results from two US treatment centres. Br J Haematol. [Epub ahead of print]
Full-text Article:  http://scholars.fhcrc.org/2732/
PubMed Record: http://www.ncbi.nlm.nih.gov/pubmed/24387011?otool=fhcrclib

Slichter, C.K., Friedrich, D.P., Smith, R.J., Walsh, P.N., Mize, G., Czartoski, J.L., McElrath, M.J., Frahm, N. (2013). Measuring inhibition of HIV replication by ex vivo CD8 T cells. J Immunol Methods. [Epub ahead of print]
Full-text Article:  http://scholars.fhcrc.org/2710/
PubMed Record: http://www.ncbi.nlm.nih.gov/pubmed/24374374?otool=fhcrclib

Slyker, J.A., Patterson, J., Ambler, G., Richardson, B.A., Maleche-Obimbo, E., Bosire, R., Mbori-Ngacha, D., Farquhar, C., John-Stewart, G. (2014). Correlates and outcomes of preterm birth, low birth weight, and small for gestational age in HIV-exposed uninfected infants. BMC Pregnancy Childbirth, 14(1), 7.
Full-text Article:  http://scholars.fhcrc.org/2750/
PubMed Record: http://www.ncbi.nlm.nih.gov/pubmed/24397463?otool=fhcrclib

Srinivasan, S., Morgan, M.T., Liu, C., Matsen, F.A., Hoffman, N.G., Fiedler, T.L., Agnew, K.J., Marrazzo, J.M., Fredricks, D.N. (2013). More than meets the eye: associations of vaginal bacteria with gram stain morphotypes using molecular phylogenetic analysis. PLoS One, 8(10), e78633. PMCID: PMC3840219.
Full-text Article:  http://scholars.fhcrc.org/2601/
PubMed Record: http://www.ncbi.nlm.nih.gov/pubmed/24302980?otool=fhcrclib

Whalen, C.J., Donnell, D., Tartakovsky, M. (2014). Supporting research sites in resource-limited settings: challenges in implementing information technology infrastructure. Journal of acquired immune deficiency syndromes, 65 Suppl 1, S44-9.
Full-text Article:  http://scholars.fhcrc.org/2711/
PubMed Record: http://www.ncbi.nlm.nih.gov/pubmed/24321986?otool=fhcrclib

Zaniello, B.A., Gottlieb, G.S. (2014). Photo quiz: a 58-year-old immunosuppressed male with chronic cough, diarrhea, and a new "pressure" ulcer. J Clin Microbiol, 52(1), 1.
Full-text Article:  http://scholars.fhcrc.org/2672/
PubMed Record: http://www.ncbi.nlm.nih.gov/pubmed/24363406?otool=fhcrclib

Zaniello, B.A., Gottlieb, G.S. (2014). Answer to january 2014 photo quiz. J Clin Microbiol, 52(1), 382.
Full-text Article:  http://scholars.fhcrc.org/2673/
PubMed Record: http://www.ncbi.nlm.nih.gov/pubmed/24363407?otool=fhcrclib

Zehn, D., Roepke, S., Weakly, K., Bevan, M.J., Prlic, M. (2013). Inflammation and TCR Signal Strength Determine the Breadth of the T Cell Response in a Bim-Dependent Manner. Journal of immunology. [Epub ahead of print]
Full-text Article:  http://scholars.fhcrc.org/2611/
PubMed Record: http://www.ncbi.nlm.nih.gov/pubmed/24273000?otool=fhcrclib

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